Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX507223: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318365' containing sample 'VET0399R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 859.5M bases, 419.9Mb downloads

UUID: 7d012309-fbb3-4839-8f9d-b4a0cf6aed32

Design: Illumina sequencing of Staphylococcus aureus VET0399R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228723 • SRP045008 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0399R

SAMN02404213 • SRS586189 • All experiments • All runs

Organism: Staphylococcus aureus VET0399R

Library:

Name: Pond-318365

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470094.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8SR

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55153

research_project: RP-513

root_sample_id: SM-4PMVE

sample_id: SM-5C8SR

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 859.5M bases, 419.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1212987	2,123,880	429M	209.8Mb	2014-04-02
SRR1530996	2,130,986	430.5M	210.1Mb	2014-07-28

ID:: 706527

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