Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX567364: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319783' containing sample 'VET0809S'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.4M spots, 881.8M bases, 398.1Mb downloads

UUID: 8d70fe0c-fe61-47b7-828c-3fa7c18706c2

Design: Illumina sequencing of Staphylococcus aureus VET0809S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228856 • SRP042810 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0809S

SAMN02404346 • SRS626878 • All experiments • All runs

Organism: Staphylococcus aureus VET0809S

Library:

Name: Pond-319783

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470837.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDHR

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55263

research_project: RP-513

root_sample_id: SM-4POA6

sample_id: SM-5CDHR

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.4M spots, 881.8M bases, 398.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1329232	2,159,783	436.3M	197.2Mb	2014-06-03
SRR1329281	2,205,584	445.5M	200.8Mb	2014-06-03

ID:: 810181

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