Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX359171: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-273412' containing sample 'Staphylococcus aureus M0041'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.7M spots, 1.3G bases, 650.3Mb downloads

UUID: 183ac946-ff13-48b3-92a1-c5aabefd3b4c

Design: Illumina sequencing of Staphylococcus aureus M0041 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216183 • SRP030249 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0041

SAMN02325138 • SRS486832 • All experiments • All runs

Organism: Staphylococcus aureus M0041

Library:

Name: Pond-273412

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385185.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHEP

material_type: DNA:DNA Somatic

product_order: PDO-1796

product_part_number: P-WG-0004

project: G44903

research_project: RP-433

root_sample_id: SM-4CY4Y

sample_id: SM-4RHEP

work_request: 37545

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-17 15:33:01.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.7M spots, 1.3G bases, 650.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001526	3,369,473	680.6M	328.9Mb	2013-09-24
SRR1001527	3,300,700	666.7M	321.4Mb	2013-09-24

ID:: 507472

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