Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX359216: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-273463' containing sample 'Staphylococcus aureus M0099'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.7M spots, 1.2G bases, 551.8Mb downloads

UUID: 83e46cc3-c732-465e-a3b5-24218395882e

Design: Illumina sequencing of Staphylococcus aureus M0099 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216227 • SRP030294 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0099

SAMN02325182 • SRS486877 • All experiments • All runs

Organism: Staphylococcus aureus M0099

Library:

Name: Pond-273463

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385233.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHG6

material_type: DNA:DNA Somatic

product_order: PDO-1796

product_part_number: P-WG-0004

project: G44947

research_project: RP-433

root_sample_id: SM-4CY6C

sample_id: SM-4RHG6

work_request: 37545

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-17 15:33:01.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.7M spots, 1.2G bases, 551.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001621	2,824,502	570.5M	272.6Mb	2013-09-24
SRR1001622	2,884,332	582.6M	279.2Mb	2013-09-24

ID:: 507517

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity