Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364352: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275846' containing sample 'Staphylococcus aureus M0420'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.2M spots, 644.5M bases, 276.6Mb downloads

UUID: 3294a9d5-b485-4bab-8a31-b37ab16bf3b6

Design: Illumina sequencing of Staphylococcus aureus M0420 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216449 • SRP031199 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0420

SAMN02325403 • SRS490770 • All experiments • All runs

Organism: Staphylococcus aureus M0420

Library:

Name: Pond-275846

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 386029.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJT7

material_type: DNA:DNA Somatic

product_order: PDO-1799

product_part_number: P-WG-0004

project: G44996

research_project: RP-433

root_sample_id: SM-4CYIW

sample_id: SM-4RJT7

work_request: 37548

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-10 22:09:59.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.2M spots, 644.5M bases, 276.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011847	1,590,601	321.3M	138.3Mb	2013-10-16
SRR1011848	1,599,859	323.2M	138.3Mb	2013-10-16

ID:: 521170

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