Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX363542: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277800' containing sample 'Staphylococcus aureus M0677'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 688.9M bases, 325.1Mb downloads

UUID: 451afaed-01ef-4e33-a327-d54c590ae8e5

Design: Illumina sequencing of Staphylococcus aureus M0677 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216622 • SRP030817 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0677

SAMN02325575 • SRS490172 • All experiments • All runs

Organism: Staphylococcus aureus M0677

Library:

Name: Pond-277800

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394415.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T8EQ

material_type: DNA:DNA Somatic

product_order: PDO-1801

product_part_number: P-WG-0004

project: G44652

research_project: RP-433

root_sample_id: SM-4C87W

sample_id: SM-4T8EQ

work_request: 37550

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 00:01:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 688.9M bases, 325.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010552	1,689,506	341.3M	160.6Mb	2013-10-09
SRR1010553	1,720,979	347.6M	164.5Mb	2013-10-09

ID:: 515979

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