Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX373468: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282969' containing sample 'Staphylococcus aureus M1511'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.1M spots, 634M bases, 284.4Mb downloads

UUID: b2fb02b6-b103-4ba8-adcd-e49d80dc0f5f

Design: Illumina sequencing of Staphylococcus aureus M1511 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221439 • SRP032607 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1511

SAMN02364032 • SRS498830 • All experiments • All runs

Organism: Staphylococcus aureus M1511

Library:

Name: Pond-282969

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409497.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOTS

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48724

research_project: RP-433

root_sample_id: SM-4D1NG

sample_id: SM-4WOTS

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.1M spots, 634M bases, 284.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025104	1,561,028	315.3M	141.5Mb	2013-11-05
SRR1025105	1,577,368	318.6M	142.8Mb	2013-11-05

ID:: 533681

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