Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX392241: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-286555' containing sample 'Staphylococcus aureus KINB6023'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 855.1M bases, 432.9Mb downloads

UUID: 54cf7050-742e-4c58-b4cb-7c744185fc01

Design: Illumina sequencing of Staphylococcus aureus KINB6023 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Orange County

PRJNA223945 • SRP034305 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus KINB6023

SAMN02381685 • SRS515407 • All experiments • All runs

Organism: Staphylococcus aureus KINB6023

Library:

Name: Pond-286555

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 417984.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YLZG

material_type: DNA:DNA Somatic

product_order: PDO-2265

product_part_number: P-WG-0004

project: G49904

research_project: RP-493

root_sample_id: SM-4T2HT

sample_id: SM-4YLZG

work_request: 38773

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-13 00:20:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.2M spots, 855.1M bases, 432.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050193	2,119,928	428.2M	217.1Mb	2013-12-15
SRR1050194	2,113,270	426.9M	215.9Mb	2013-12-15

ID:: 563088

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