Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX392312: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-287673' containing sample 'Staphylococcus aureus OCMM6137'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.5M spots, 699.2M bases, 339.3Mb downloads

UUID: 9988e9cd-d986-4ecd-bfd8-3b6d81674b65

Design: Illumina sequencing of Staphylococcus aureus OCMM6137 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Orange County

PRJNA224039 • SRP034353 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus OCMM6137

SAMN02381778 • SRS515458 • All experiments • All runs

Organism: Staphylococcus aureus OCMM6137

Library:

Name: Pond-287673

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 419515.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YW1D

material_type: DNA:DNA Somatic

product_order: PDO-2265

product_part_number: P-WG-0004

project: G49985

research_project: RP-493

root_sample_id: SM-4T2N8

sample_id: SM-4YW1D

work_request: 38774

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-18 11:59:18.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.5M spots, 699.2M bases, 339.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050307	1,759,369	355.4M	168.6Mb	2013-12-15
SRR1050308	1,701,921	343.8M	170.7Mb	2013-12-15

ID:: 563159

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