Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX422894: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293564' containing sample 'Staphylococcus aureus T62328'
2 ILLUMINA (Illumina HiSeq 2000) runs: 7.4M spots, 1.5G bases, 735.7Mb downloads

UUID: 27b7b694-67d6-463b-aa2c-1cca53497331

Design: Illumina sequencing of Staphylococcus aureus T62328 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224367 • SRP035083 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T62328

SAMN02383657 • SRS526939 • All experiments • All runs

Organism: Staphylococcus aureus T62328

Library:

Name: Pond-293564

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433246.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J9X

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50743

research_project: RP-509

root_sample_id: SM-4T4TK

sample_id: SM-53J9X

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 7.4M spots, 1.5G bases, 735.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103512	3,728,758	753.2M	373.2Mb	2014-01-07
SRR1103600	3,623,788	732M	362.5Mb	2014-01-07

ID:: 598368

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