Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX422959: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293472' containing sample 'Staphylococcus aureus F68118'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.2M spots, 1.2G bases, 641.1Mb downloads

UUID: 325659e9-7055-44b3-816f-d02869aaa9bd

Design: Illumina sequencing of Staphylococcus aureus F68118 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224466 • SRP035138 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F68118

SAMN02383755 • SRS526994 • All experiments • All runs

Organism: Staphylococcus aureus F68118

Library:

Name: Pond-293472

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433154.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J7B

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50653

research_project: RP-509

root_sample_id: SM-4T4LE

sample_id: SM-53J7B

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.2M spots, 1.2G bases, 641.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103633	3,039,936	614.1M	316.2Mb	2014-01-07
SRR1103658	3,117,921	629.8M	324.9Mb	2014-01-07

ID:: 598433

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