Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX422892: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293545' containing sample 'Staphylococcus aureus F80349'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.4M spots, 1.1G bases, 546.6Mb downloads

UUID: a3ec4936-55e9-4d30-9108-c39c992e3f1e

Design: Illumina sequencing of Staphylococcus aureus F80349 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224470 • SRP035081 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F80349

SAMN02383759 • SRS526937 • All experiments • All runs

Organism: Staphylococcus aureus F80349

Library:

Name: Pond-293545

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433227.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J9E

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50657

research_project: RP-509

root_sample_id: SM-4T4LI

sample_id: SM-53J9E

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.4M spots, 1.1G bases, 546.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103506	2,642,679	533.8M	269.7Mb	2014-01-07
SRR1103700	2,707,735	547M	276.8Mb	2014-01-07

ID:: 598366

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