Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX392096: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-295472' containing sample 'Staphylococcus aureus H31290'
1 ILLUMINA (Illumina HiSeq 2000) run: 5.2M spots, 1.1G bases, 510Mb downloads

UUID: 3296ef30-041e-42ad-b710-bd39e30311cb

Design: Illumina sequencing of Staphylococcus aureus H31290 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224608 • SRP034187 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus H31290

SAMN02384074 • SRS515289 • All experiments • All runs

Organism: Staphylococcus aureus H31290

Library:

Name: Pond-295472

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 435320.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:543JC

material_type: DNA:DNA Somatic

product_order: PDO-2359

product_part_number: P-WG-0004

project: G51066

research_project: RP-509

root_sample_id: SM-4T3FO

sample_id: SM-543JC

work_request: 38946

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-02 16:38:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 5.2M spots, 1.1G bases, 510Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049997	5,212,133	1.1G	510Mb	2013-12-15

ID:: 562943

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