Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX392142: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-295549' containing sample 'Staphylococcus aureus T33147'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.9M spots, 786.5M bases, 388.8Mb downloads

UUID: 1aa23cd2-43b3-4ed1-874d-0a6760018626

Design: Illumina sequencing of Staphylococcus aureus T33147 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224644 • SRP034223 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T33147

SAMN02384109 • SRS515325 • All experiments • All runs

Organism: Staphylococcus aureus T33147

Library:

Name: Pond-295549

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 435397.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:543LJ

material_type: DNA:DNA Somatic

product_order: PDO-2359

product_part_number: P-WG-0004

project: G51038

research_project: RP-509

root_sample_id: SM-4T3EV

sample_id: SM-543LJ

work_request: 38945

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-02 16:38:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.9M spots, 786.5M bases, 388.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050040	3,893,466	786.5M	388.8Mb	2013-12-15

ID:: 562989

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