Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX555680: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315261' containing sample 'C2679'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.5M spots, 506.9M bases, 231.4Mb downloads

UUID: d8566a0e-e0e9-4560-8c48-b3c7e571e726

Design: Illumina sequencing of Staphylococcus aureus C2679 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226436 • SRP042440 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus C2679

SAMN02391309 • SRS622770 • All experiments • All runs

Organism: Staphylococcus aureus C2679

Library:

Name: Pond-315261

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445772.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571WQ

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51828

research_project: RP-513

root_sample_id: SM-4Q7FW

sample_id: SM-571WQ

work_request: 39112

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.5M spots, 506.9M bases, 231.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303280	2,509,287	506.9M	231.4Mb	2014-05-29

ID:: 794690

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