Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX548080: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311283' containing sample 'GD2010-158'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.2M spots, 647.8M bases, 304.7Mb downloads

UUID: a728a135-d912-4590-b2c1-e7561fd08bd1

Design: Illumina sequencing of Staphylococcus aureus GD2010-158 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus GD2010-158

SAMN02391361 • SRS616337 • All experiments • All runs

Organism: Staphylococcus aureus GD2010-158

Library:

Name: Pond-311283

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445696.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571UK

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51708

research_project: RP-513

root_sample_id: SM-4PAJI

sample_id: SM-571UK

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.2M spots, 647.8M bases, 304.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293497	3,206,980	647.8M	304.7Mb	2014-05-21

ID:: 785038

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