Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX479796: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322213' containing sample 'Staphylococcus aureus T16600'
1 ILLUMINA (Illumina HiSeq 2000) run: 6.3M spots, 1.3G bases, 647.1Mb downloads

UUID: 482cef64-6b78-4d5e-a6de-8da65f17fbd3

Design: Illumina sequencing of Staphylococcus aureus T16600 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227518 • SRP039220 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T16600

SAMN02402395 • SRS565059 • All experiments • All runs

Organism: Staphylococcus aureus T16600

Library:

Name: Pond-322213

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485456.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G6EW

material_type: DNA:DNA Somatic

product_order: PDO-2502

product_part_number: P-WG-0004

project: G53879

research_project: RP-509

root_sample_id: SM-4T1HU

sample_id: SM-5G6EW

work_request: 39226

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 6.3M spots, 1.3G bases, 647.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180626	6,323,729	1.3G	647.1Mb	2014-03-01

ID:: 669230

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity