Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX468132: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315452' containing sample 'Staphylococcus aureus F48950'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.9M spots, 999.9M bases, 473.8Mb downloads

UUID: 31a5fd13-c59a-4375-9e4d-71bff24daf2d

Design: Illumina sequencing of Staphylococcus aureus F48950 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227578 • SRP037294 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F48950

SAMN02402502 • SRS555647 • All experiments • All runs

Organism: Staphylococcus aureus F48950

Library:

Name: Pond-315452

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462761.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASVB

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G54027

research_project: RP-509

root_sample_id: SM-4T28T

sample_id: SM-5ASVB

work_request: 39229

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.9M spots, 999.9M bases, 473.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165793	2,484,287	501.8M	238.2Mb	2014-02-09
SRR1167403	2,465,640	498.1M	235.6Mb	2014-02-11

ID:: 648320

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