Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX467875: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315498' containing sample 'Staphylococcus aureus W34841'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.7M spots, 1.4G bases, 693.7Mb downloads

UUID: 2c543f9d-f11a-4d9e-b07d-f4c9521ef8fa

Design: Illumina sequencing of Staphylococcus aureus W34841 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227719 • SRP037087 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W34841

SAMN02402643 • SRS555438 • All experiments • All runs

Organism: Staphylococcus aureus W34841

Library:

Name: Pond-315498

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462641.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASRV

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G53945

research_project: RP-509

root_sample_id: SM-4T1J9

sample_id: SM-5ASRV

work_request: 39228

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 02:47:49.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.7M spots, 1.4G bases, 693.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165459	3,330,494	672.8M	345.9Mb	2014-02-09
SRR1167143	3,367,190	680.2M	347.8Mb	2014-02-11

ID:: 648063

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