Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX473193: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319638' containing sample 'DAR5815'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.5M spots, 1.1G bases, 501.9Mb downloads

UUID: 574dc619-8796-43d9-9038-9d537a0e1457

Design: Illumina sequencing of Staphylococcus aureus DAR5815 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA USA100

PRJNA228449 • SRP038264 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus DAR5815

SAMN02403909 • SRS559546 • All experiments • All runs

Organism: Staphylococcus aureus DAR5815

Library:

Name: Pond-319638

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471173.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CGMZ

material_type: DNA:DNA Somatic

product_order: PDO-2701

product_part_number: P-WG-0004

project: G54733

research_project: RP-506

root_sample_id: SM-4MEW2

sample_id: SM-5CGMZ

work_request: 39314

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.5M spots, 1.1G bases, 501.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172606	2,742,328	554M	252Mb	2014-02-20
SRR1175248	2,724,579	550.4M	249.8Mb	2014-02-24

ID:: 653683

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