Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX566084: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318319' containing sample 'VET0152R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.3M spots, 1.1G bases, 538.9Mb downloads

UUID: 21c17b7c-2700-4fa9-a9b9-c4d6ff42846d

Design: Illumina sequencing of Staphylococcus aureus VET0152R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228556 • SRP042700 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0152R

SAMN02404048 • SRS626340 • All experiments • All runs

Organism: Staphylococcus aureus VET0152R

Library:

Name: Pond-318319

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469952.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8PK

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55087

research_project: RP-513

root_sample_id: SM-4P93Y

sample_id: SM-5C8PK

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.3M spots, 1.1G bases, 538.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1326970	2,712,524	547.9M	274.6Mb	2014-06-03
SRR1340403	2,633,492	532M	264.4Mb	2014-06-05

ID:: 808901

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