Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX566909: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318755' containing sample 'VET0188R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 15.5M spots, 3.1G bases, 1.5Gb downloads

UUID: 4986083a-edf8-46b4-a364-aafac4a7cdca

Design: Illumina sequencing of Staphylococcus aureus VET0188R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228579 • SRP042772 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0188R

SAMN02404071 • SRS626784 • All experiments • All runs

Organism: Staphylococcus aureus VET0188R

Library:

Name: Pond-318755

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471516.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLFO

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55306

research_project: RP-513

root_sample_id: SM-4Q5NG

sample_id: SM-5CLFO

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 15.5M spots, 3.1G bases, 1.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR1328308	3,912,623	790.3M	385.5Mb	2014-06-03
SRR1342382	3,870,216	781.8M	385.3Mb	2014-06-05
SRR1344767	3,848,493	777.4M	379.5Mb	2014-06-06
SRR1346228	3,881,717	784.1M	384.1Mb	2014-06-06

ID:: 809726

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