Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX567653: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318697' containing sample 'VET0201R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 37,731 spots, 7.6M bases, 7.1Mb downloads

UUID: 09b59e67-b44c-479b-a256-1ff75c5de180

Design: Illumina sequencing of Staphylococcus aureus VET0201R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228592 • SRP042869 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0201R

SAMN02404084 • SRS626962 • All experiments • All runs

Organism: Staphylococcus aureus VET0201R

Library:

Name: Pond-318697

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471458.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLE1

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55317

research_project: RP-513

root_sample_id: SM-4Q5NT

sample_id: SM-5CLE1

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 37,731 spots, 7.6M bases, 7.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1329808	9,621	1.9M	1.8Mb	2014-06-03
SRR1330209	9,265	1.9M	1.8Mb	2014-06-03
SRR1330261	9,544	1.9M	1.8Mb	2014-06-04
SRR1342136	9,301	1.9M	1.8Mb	2014-06-05

ID:: 810470

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