Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX507305: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318407' containing sample 'VET0455R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 819.2M bases, 380.5Mb downloads

UUID: 45e01929-d8e0-45e1-9ab9-628795f0c989

Design: Illumina sequencing of Staphylococcus aureus VET0455R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228763 • SRP045021 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0455R

SAMN02404253 • SRS586264 • All experiments • All runs

Organism: Staphylococcus aureus VET0455R

Library:

Name: Pond-318407

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470136.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8V4

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55191

research_project: RP-513

root_sample_id: SM-4PMWJ

sample_id: SM-5C8V4

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.1M spots, 819.2M bases, 380.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1213076	2,030,978	410.3M	190.4Mb	2014-04-02
SRR1531012	2,024,374	408.9M	190Mb	2014-07-28

ID:: 706609

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