Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX567419: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319716' containing sample 'VET1897R' from individual 'VET0045'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.7M spots, 948.8M bases, 422.2Mb downloads

UUID: e1b94fe4-fa3c-4661-a331-22e1464b3c48

Design: Illumina sequencing of Staphylococcus aureus VET1897R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228829 • SRP042857 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1897R

SAMN02404319 • SRS626925 • All experiments • All runs

Organism: Staphylococcus aureus VET1897R

Library:

Name: Pond-319716

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470770.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDFU

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55243

research_project: RP-513

root_sample_id: SM-4PO9D

sample_id: SM-5CDFU

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.7M spots, 948.8M bases, 422.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1329296	2,374,236	479.6M	213.1Mb	2014-06-03
SRR1347542	2,322,822	469.2M	209.1Mb	2014-06-07

ID:: 810236

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