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SRX26706776: Whole-genome sequencing of pathogens from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 792,929 spots, 444.6M bases, 278.6Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN44699185 • SRS23197928 • All experiments • All runs
Organism: Enterococcus faecium
Library:
Name: BWH_406_E_faem
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 792,929 spots, 444.6M bases, 278.6Mb
Run# of Spots# of BasesSizePublished
SRR31329292792,929444.6M278.6Mb2024-11-13

ID:
36083178

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