Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX359143: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-273454' containing sample 'Staphylococcus aureus M0004'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.3M spots, 866.2M bases, 406.2Mb downloads

UUID: b72077ab-1b60-4fa0-9f7e-e7f2e5415144

Design: Illumina sequencing of Staphylococcus aureus M0004 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216155 • SRP030221 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0004

SAMN02325110 • SRS486804 • All experiments • All runs

Organism: Staphylococcus aureus M0004

Library:

Name: Pond-273454

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385224.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHFW

material_type: DNA:DNA Somatic

product_order: PDO-1796

product_part_number: P-WG-0004

project: G44875

research_project: RP-433

root_sample_id: SM-4CY43

sample_id: SM-4RHFW

work_request: 37545

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-17 15:33:01.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.3M spots, 866.2M bases, 406.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001471	2,165,608	437.5M	205.4Mb	2013-09-24
SRR1001472	2,122,335	428.7M	200.7Mb	2013-09-24

ID:: 507444

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