Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX363649: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277967' containing sample 'Staphylococcus aureus M0936'
2 ILLUMINA (Illumina HiSeq 2000) runs: 31.9M spots, 6.4G bases, 2.8Gb downloads

UUID: 4ce7d8e0-f50d-4165-a7e9-597b005efdbf

Design: Illumina sequencing of Staphylococcus aureus M0936 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216875 • SRP030924 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0936

SAMN02325826 • SRS490279 • All experiments • All runs

Organism: Staphylococcus aureus M0936

Library:

Name: Pond-277967

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394113.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T88N

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46125

research_project: RP-433

root_sample_id: SM-4C9MW

sample_id: SM-4T88N

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 31.9M spots, 6.4G bases, 2.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR1010771	16,138,746	3.3G	1.4Gb	2013-10-09
SRR1010772	15,737,272	3.2G	1.4Gb	2013-10-09

ID:: 516086

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity