Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364570: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278639' containing sample 'Staphylococcus aureus M1047'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 494.2Mb downloads

UUID: 5c1ee5c1-5e8b-406c-8f2a-0028ca700884

Design: Illumina sequencing of Staphylococcus aureus M1047 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217138 • SRP031415 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1047

SAMN02334662 • SRS490987 • All experiments • All runs

Organism: Staphylococcus aureus M1047

Library:

Name: Pond-278639

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396211.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWML

material_type: DNA:DNA Somatic

product_order: PDO-1932

product_part_number: P-WG-0004

project: G46201

research_project: RP-433

root_sample_id: SM-4C5FU

sample_id: SM-4UWML

work_request: 37965

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 03:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 494.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012193	2,557,121	516.5M	246.6Mb	2013-10-16
SRR1012194	2,562,239	517.6M	247.5Mb	2013-10-16

ID:: 521388

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