Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX368132: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279980' containing sample 'Staphylococcus aureus M1421'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.5M spots, 709.8M bases, 317.2Mb downloads

UUID: a2fd362a-9434-4f54-9a8e-a6bd6fafc1af

Design: Illumina sequencing of Staphylococcus aureus M1421 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218414 • SRP032118 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1421

SAMN02350593 • SRS494173 • All experiments • All runs

Organism: Staphylococcus aureus M1421

Library:

Name: Pond-279980

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402432.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJPB

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47877

research_project: RP-433

root_sample_id: SM-4CW98

sample_id: SM-4VJPB

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.5M spots, 709.8M bases, 317.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017390	1,754,963	354.5M	158.2Mb	2013-10-25
SRR1017391	1,758,958	355.3M	159Mb	2013-10-25

ID:: 526763

SRA

Sequence Read Archive

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