Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX373490: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282998' containing sample 'Staphylococcus aureus M1539'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 694.7M bases, 317.3Mb downloads

UUID: 95135441-fe7e-45b8-8524-9bb9caa7325e

Design: Illumina sequencing of Staphylococcus aureus M1539 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221460 • SRP032626 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1539

SAMN02364053 • SRS498851 • All experiments • All runs

Organism: Staphylococcus aureus M1539

Library:

Name: Pond-282998

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409526.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOUM

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48745

research_project: RP-433

root_sample_id: SM-4D1O2

sample_id: SM-4WOUM

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 694.7M bases, 317.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025146	1,726,947	348.8M	159.1Mb	2013-11-05
SRR1025147	1,712,221	345.9M	158.2Mb	2013-11-05

ID:: 533703

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