Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX392154: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-286548' containing sample 'Staphylococcus aureus AMMC6119'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 844.7M bases, 420.3Mb downloads

UUID: dd860479-c154-4ae5-9419-5e9d980bbe22

Design: Illumina sequencing of Staphylococcus aureus AMMC6119 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Orange County

PRJNA223960 • SRP034231 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus AMMC6119

SAMN02381699 • SRS515333 • All experiments • All runs

Organism: Staphylococcus aureus AMMC6119

Library:

Name: Pond-286548

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 417977.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YLZ9

material_type: DNA:DNA Somatic

product_order: PDO-2265

product_part_number: P-WG-0004

project: G49916

research_project: RP-493

root_sample_id: SM-4T2I8

sample_id: SM-4YLZ9

work_request: 38773

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-13 00:20:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.2M spots, 844.7M bases, 420.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050101	2,091,844	422.6M	210.5Mb	2013-12-15
SRR1050102	2,089,713	422.1M	209.8Mb	2013-12-15

ID:: 563001

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