Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX391696: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-291703' containing sample 'Staphylococcus aureus GGMC6053'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.1M spots, 1.2G bases, 695.1Mb downloads

UUID: b79814e8-8f71-4509-9a80-4d61046999ca

Design: Illumina sequencing of Staphylococcus aureus GGMC6053 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Orange County

PRJNA224080 • SRP034027 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus GGMC6053

SAMN02381837 • SRS514926 • All experiments • All runs

Organism: Staphylococcus aureus GGMC6053

Library:

Name: Pond-291703

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 427771.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:52PK5

material_type: DNA:DNA Somatic

product_order: PDO-2326

product_part_number: P-WG-0004

project: G50547

research_project: RP-493

root_sample_id: SM-4RVHY

sample_id: SM-52PK5

work_request: 38888

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-29 16:10:35.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.1M spots, 1.2G bases, 695.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049458	3,046,866	615.5M	349.2Mb	2013-12-13
SRR1049459	3,016,134	609.3M	345.9Mb	2013-12-13

ID:: 562450

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