Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX422822: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293554' containing sample 'Staphylococcus aureus F41882'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.2M spots, 1.1G bases, 509.1Mb downloads

UUID: d80c2996-a208-4750-9e2f-225a47f926bb

Design: Illumina sequencing of Staphylococcus aureus F41882 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224323 • SRP035019 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F41882

SAMN02383613 • SRS526873 • All experiments • All runs

Organism: Staphylococcus aureus F41882

Library:

Name: Pond-293554

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433236.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J9N

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50700

research_project: RP-509

root_sample_id: SM-4T4SB

sample_id: SM-53J9N

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.2M spots, 1.1G bases, 509.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103423	2,569,356	519M	251Mb	2014-01-07
SRR1103501	2,637,986	532.9M	258.1Mb	2014-01-07

ID:: 598296

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Sequence Read Archive

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