Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX391517: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-291766' containing sample 'Staphylococcus aureus F52748'
2 ILLUMINA (Illumina HiSeq 2000) runs: 8.4M spots, 1.7G bases, 919Mb downloads

UUID: 25a8c28e-f666-4f14-a4d9-30d15ff6305f

Design: Illumina sequencing of Staphylococcus aureus F52748 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224412 • SRP033894 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F52748

SAMN02383701 • SRS514751 • All experiments • All runs

Organism: Staphylococcus aureus F52748

Library:

Name: Pond-291766

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 427832.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:52PLX

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50600

research_project: RP-509

root_sample_id: SM-4T4JU

sample_id: SM-52PLX

work_request: 38888

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-29 16:10:35.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 8.4M spots, 1.7G bases, 919Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049156	4,173,884	843.1M	457.7Mb	2013-12-13
SRR1049157	4,209,593	850.3M	461.3Mb	2013-12-13

ID:: 562271

SRA

Sequence Read Archive

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