Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX547963: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311280' containing sample '25(2889)'
1 ILLUMINA (Illumina HiSeq 2000) run: 3M spots, 599.2M bases, 287.6Mb downloads

UUID: 32b18044-d7ce-45b4-a1e5-1aab5f9830d8

Design: Illumina sequencing of Staphylococcus aureus 25(2889) via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 25(2889)

SAMN02391372 • SRS616222 • All experiments • All runs

Organism: Staphylococcus aureus 25(2889)

Library:

Name: Pond-311280

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445693.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571UH

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51715

research_project: RP-513

root_sample_id: SM-4PAJT

sample_id: SM-571UH

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3M spots, 599.2M bases, 287.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293380	2,966,397	599.2M	287.6Mb	2014-05-21

ID:: 784921

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