Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479815: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-323104' containing sample 'Staphylococcus aureus F19490'
1 ILLUMINA (Illumina HiSeq 2000) run: 6.2M spots, 1.3G bases, 597Mb downloads

UUID: 4184cfe2-610a-41be-b638-8a7e76feb98e

Design: Illumina sequencing of Staphylococcus aureus F19490 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA226889 • SRP039228 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F19490

SAMN02398829 • SRS565067 • All experiments • All runs

Organism: Staphylococcus aureus F19490

Library:

Name: Pond-323104

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485814.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G8PY

material_type: DNA:DNA Somatic

product_order: PDO-2425

product_part_number: P-WG-0004

project: G52027

research_project: RP-509

root_sample_id: SM-4T66S

sample_id: SM-5G8PY

work_request: 39161

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 6.2M spots, 1.3G bases, 597Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180649	6,209,943	1.3G	597Mb	2014-03-01

ID:: 669249

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