Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX463517: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316232' containing sample 'Staphylococcus aureus F89075'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.6M spots, 1.1G bases, 547.2Mb downloads

UUID: a6fdb07a-229f-4b62-856b-6921b5b7a106

Design: Illumina sequencing of Staphylococcus aureus F89075 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA226903 • SRP036487 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F89075

SAMN02398843 • SRS552245 • All experiments • All runs

Organism: Staphylococcus aureus F89075

Library:

Name: Pond-316232

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 463512.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BC7X

material_type: DNA:DNA Somatic

product_order: PDO-2426

product_part_number: P-WG-0004

project: G52156

research_project: RP-509

root_sample_id: SM-4T65H

sample_id: SM-5BC7X

work_request: 39164

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.6M spots, 1.1G bases, 547.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1159688	2,793,025	564.2M	272.5Mb	2014-02-04
SRR1162664	2,817,786	569.2M	274.7Mb	2014-02-06

ID:: 643685

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