Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479705: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322220' containing sample 'Staphylococcus aureus W75229'
1 ILLUMINA (Illumina HiSeq 2000) run: 7.4M spots, 1.5G bases, 749.2Mb downloads

UUID: 04800268-9013-4c8a-8022-471e28310c33

Design: Illumina sequencing of Staphylococcus aureus W75229 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227521 • SRP039191 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W75229

SAMN02402398 • SRS565030 • All experiments • All runs

Organism: Staphylococcus aureus W75229

Library:

Name: Pond-322220

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485459.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G6F4

material_type: DNA:DNA Somatic

product_order: PDO-2502

product_part_number: P-WG-0004

project: G53883

research_project: RP-509

root_sample_id: SM-4T1I1

sample_id: SM-5G6F4

work_request: 39226

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 7.4M spots, 1.5G bases, 749.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180509	7,376,873	1.5G	749.2Mb	2014-03-01

ID:: 669139

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