Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX468127: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315417' containing sample 'Staphylococcus aureus W42196'
2 ILLUMINA (Illumina HiSeq 2000) runs: 7M spots, 1.4G bases, 728.6Mb downloads

UUID: dfe168c5-2f33-48c9-9757-51e7bc740bbc

Design: Illumina sequencing of Staphylococcus aureus W42196 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227652 • SRP037288 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W42196

SAMN02402576 • SRS555641 • All experiments • All runs

Organism: Staphylococcus aureus W42196

Library:

Name: Pond-315417

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462726.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASUB

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G54037

research_project: RP-509

root_sample_id: SM-4T294

sample_id: SM-5ASUB

work_request: 39229

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 7M spots, 1.4G bases, 728.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165787	3,523,143	711.7M	366.2Mb	2014-02-09
SRR1167458	3,496,156	706.2M	362.3Mb	2014-02-11

ID:: 648315

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Sequence Read Archive

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