Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473157: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319641' containing sample 'Staphylococcus aureus F71592'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.6M spots, 1.3G bases, 663.7Mb downloads

UUID: 6ab291a2-2361-4c5f-8657-f66d3b6d6ad7

Design: Illumina sequencing of Staphylococcus aureus F71592 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227824 • SRP038229 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F71592

SAMN02403134 • SRS559510 • All experiments • All runs

Organism: Staphylococcus aureus F71592

Library:

Name: Pond-319641

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471239.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CGN3

material_type: DNA:DNA Somatic

product_order: PDO-2545

product_part_number: P-WG-0004

project: G54659

research_project: RP-509

root_sample_id: SM-4SZZQ

sample_id: SM-5CGN3

work_request: 39314

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.6M spots, 1.3G bases, 663.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172570	3,294,838	665.6M	332.8Mb	2014-02-20
SRR1175218	3,281,590	662.9M	330.9Mb	2014-02-24

ID:: 653647

SRA

Sequence Read Archive

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