Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473211: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319632' containing sample 'DAR5791'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6M spots, 1.2G bases, 567.4Mb downloads

UUID: 60d86d33-039d-4cc4-9fec-53328474f600

Design: Illumina sequencing of Staphylococcus aureus DAR5791 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA USA100

PRJNA228472 • SRP038282 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus DAR5791

SAMN02403932 • SRS559564 • All experiments • All runs

Organism: Staphylococcus aureus DAR5791

Library:

Name: Pond-319632

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471167.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CGMT

material_type: DNA:DNA Somatic

product_order: PDO-2701

product_part_number: P-WG-0004

project: G54756

research_project: RP-506

root_sample_id: SM-4MEWQ

sample_id: SM-5CGMT

work_request: 39314

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6M spots, 1.2G bases, 567.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172625	2,986,301	603.2M	284.7Mb	2014-02-20
SRR1172679	2,970,089	600M	282.7Mb	2014-02-20

ID:: 653701

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