Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555748: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319969' containing sample 'VET0126R'
1 ILLUMINA (Illumina HiSeq 2000) run: 6.1M spots, 1.2G bases, 571.1Mb downloads

UUID: 53c5fc98-2e6a-4723-8d15-04da475bbdd6

Design: Illumina sequencing of Staphylococcus aureus VET0126R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228542 • SRP042478 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0126R

SAMN02404034 • SRS622832 • All experiments • All runs

Organism: Staphylococcus aureus VET0126R

Library:

Name: Pond-319969

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 473559.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CVKI

material_type: DNA:DNA Somatic

product_order: PDO-2556

product_part_number: P-WG-0004

project: G54971

research_project: RP-513

root_sample_id: SM-4P93K

sample_id: SM-5CVKI

work_request: 39345

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 6.1M spots, 1.2G bases, 571.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303401	6,067,147	1.2G	571.1Mb	2014-05-30

ID:: 794776

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