Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555671: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319980' containing sample 'VET0166R'
1 ILLUMINA (Illumina HiSeq 2000) run: 6M spots, 1.2G bases, 562.8Mb downloads

UUID: f2ffb0cd-ab72-405c-a368-6808215678cc

Design: Illumina sequencing of Staphylococcus aureus VET0166R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228567 • SRP042432 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0166R

SAMN02404059 • SRS622762 • All experiments • All runs

Organism: Staphylococcus aureus VET0166R

Library:

Name: Pond-319980

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 473569.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CVKT

material_type: DNA:DNA Somatic

product_order: PDO-2556

product_part_number: P-WG-0004

project: G54973

research_project: RP-513

root_sample_id: SM-4P94A

sample_id: SM-5CVKT

work_request: 39345

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 6M spots, 1.2G bases, 562.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303271	6,012,574	1.2G	562.8Mb	2014-05-29

ID:: 794681

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