Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567355: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318720' containing sample 'VET0195R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 12.5M spots, 2.5G bases, 1.2Gb downloads

UUID: ec68d845-9bb1-4904-a229-cd84fd10a56f

Design: Illumina sequencing of Staphylococcus aureus VET0195R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228586 • SRP042801 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0195R

SAMN02404078 • SRS626869 • All experiments • All runs

Organism: Staphylococcus aureus VET0195R

Library:

Name: Pond-318720

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471481.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLEO

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55311

research_project: RP-513

root_sample_id: SM-4Q5NN

sample_id: SM-5CLEO

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 12.5M spots, 2.5G bases, 1.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR1329224	3,150,020	636.3M	313.1Mb	2014-06-03
SRR1342151	3,122,158	630.7M	311.6Mb	2014-06-05
SRR1342190	3,101,032	626.4M	308.7Mb	2014-06-05
SRR1342374	3,121,056	630.5M	313.5Mb	2014-06-05

ID:: 810172

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Sequence Read Archive

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