Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX566928: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318691' containing sample 'VET0283R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 15.3M spots, 3.1G bases, 1.5Gb downloads

UUID: 8bbda5e0-5488-4bd6-8bba-b3d00e898058

Design: Illumina sequencing of Staphylococcus aureus VET0283R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228642 • SRP042791 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0283R

SAMN02404134 • SRS626803 • All experiments • All runs

Organism: Staphylococcus aureus VET0283R

Library:

Name: Pond-318691

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471452.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLDU

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55364

research_project: RP-513

root_sample_id: SM-4Q5PA

sample_id: SM-5CLDU

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 15.3M spots, 3.1G bases, 1.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR1328333	3,829,722	773.6M	383.7Mb	2014-06-03
SRR1344683	3,833,656	774.4M	381.8Mb	2014-06-06
SRR1344686	3,803,949	768.4M	377.9Mb	2014-06-06
SRR1346364	3,867,607	781.3M	383.8Mb	2014-06-06

ID:: 809745

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Sequence Read Archive

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