Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX548556: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318391' containing sample 'VET0331R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.4M spots, 1.1G bases, 502.3Mb downloads

UUID: 45a172c4-1b4f-4c67-a029-5ed209ef95cc

Design: Illumina sequencing of Staphylococcus aureus VET0331R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228682 • SRP044995 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0331R

SAMN02404174 • SRS616384 • All experiments • All runs

Organism: Staphylococcus aureus VET0331R

Library:

Name: Pond-318391

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470120.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8U8

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55116

research_project: RP-513

root_sample_id: SM-4PMU9

sample_id: SM-5C8U8

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.4M spots, 1.1G bases, 502.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293660	2,697,759	544.9M	250.4Mb	2014-05-21
SRR1530983	2,717,136	548.9M	251.9Mb	2014-07-28

ID:: 785514

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