Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX507299: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318390' containing sample 'VET0418R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.7M spots, 940.6M bases, 439Mb downloads

UUID: 141d5b30-c596-4b57-b545-33fbcd02ad26

Design: Illumina sequencing of Staphylococcus aureus VET0418R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0418R

SAMN02404227 • SRS586258 • All experiments • All runs

Organism: Staphylococcus aureus VET0418R

Library:

Name: Pond-318390

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470119.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8U6

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55166

research_project: RP-513

root_sample_id: SM-4PMVS

sample_id: SM-5C8U6

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.7M spots, 940.6M bases, 439Mb

Run	# of Spots	# of Bases	Size	Published
SRR1213070	2,334,058	471.5M	219.8Mb	2014-04-02
SRR1293608	2,322,469	469.1M	219.2Mb	2014-05-21

ID:: 706603

SRA

Sequence Read Archive

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