U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX2625621: Proteobacteria bacterium UBA868
1 ILLUMINA (Illumina HiSeq 2000) run: 299,952 spots, 9.2M bases, 3.3Mb downloads

Design: BWA (BWA-MEM) mapping of Proteobacteria bacterium UBA868 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 9.81
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Proteobacteria bacterium UBA868 genome recovered from SRX672316
SAMN06457893 • SRS2035578 • All experiments • All runs
Library:
Name: SRX672316.b38.bam
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 299,952 spots, 9.2M bases, 3.3Mb
Run# of Spots# of BasesSizePublished
SRR5326426299,9529.2M3.3Mb2017-09-14

ID:
3801767

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...