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SRX2620602: Patescibacteria group bacterium UBA1406
1 ILLUMINA (Illumina HiSeq 2000) run: 105,984 spots, 19.9M bases, 18Mb downloads

Design: BWA (BWA-MEM) mapping of Patescibacteria group bacterium UBA1406 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 21
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Patescibacteria group bacterium UBA1406 genome recovered from ERX250271
SAMN06457166 • SRS2030559 • All experiments • All runs
Library:
Name: ERX250271.b86.bam
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 105,984 spots, 19.9M bases, 18Mb
Run# of Spots# of BasesSizePublished
SRR5321242105,98419.9M18Mb2017-09-13

ID:
3796748

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